CDS

Accession Number TCMCG006C42311
gbkey CDS
Protein Id XP_013741803.1
Location join(166658..166861,166940..167010,167106..167120,167240..167451,167537..167599,167794..167904,167980..168164,168343..168481,168591..168708,168777..168878,168976..169218,169309..169420,169504..169533)
Gene LOC106444914
GeneID 106444914
Organism Brassica napus

Protein

Length 534aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013886349.2
Definition carotenoid 9,10(9,10)-cleavage dioxygenase 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category Q
Description Retinal pigment epithelial membrane protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00465        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008300        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010436        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016110        [VIEW IN EMBL-EBI]
GO:0016115        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016118        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016121        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016124        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045549        [VIEW IN EMBL-EBI]
GO:0046247        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGAACTGCATAGTTTCGGTCAACCCTAAACCCTCAAAGGGATTATCCTCTAAGCTTCTCGATCTTGTGGAGAGAGTTGTTGTGAAGCTCATGCACGATGCTTCTCTGCCTCTCCACTACCTCTCCGGCAACTTCGCTCCCGTGCGGGATGAAACTCCTCCGGTGAAGGATCTCCCCGTCGTCCATGGATTTCTTCCAGAGTGCTTGAATGGTGAATTTGTGAGGGTTGGTCCAAATCCCAAGTTTGATCCCGTCGCTGGATATCACTGGTTTGATGGAGATGGGATGATACATGCTGTACGCATCAAAGATGGGAAAGCAACTTATGTTTCTCGTTATGTTAAGACATCACGCCTCAAGCAGGAAGAGTTTTTCGGAGCTCCCAAATTCATGAAGATTGGGGACCTTAAGGGTCTTTTGGGATTGCTTATGGTCTATCTCCAACAGCTCAGAACCAAACTGAAAGTTTTGGACGTCTCTTATGGACATGGAACTGCTAATACAGCCCTCGTCTATCACCATGGAAAACTTCTAGCTCTCTCGGAGGCAGATAAGCCATATGTCGTCAAAGTCTTGGAAGATGGAGACCTTCAAACTCTTGGCATGATGGATTATGACAAGAGATTGACCCACTCCTTCACTGCACACCCTAAAGTTGACCCAACTACCGGTGAAATGTTTACATTTGGCTATTCGCAAACGCCACCTTATCTCACCTACAGAGTGATCTCGGAAGACGGCTTTATGCATGACCCTGTCCCAATTACTATATCTGAGCCAATCATGATGCACGATTTTGCTATTACTGAGACTTACGCAATCTTCATGGATCTTCCTATGCACTTCAGGCCAAAGGAAATGGTGAAAGAGAAGAAAATGGTATACTCATTTGATCCAACAAAAAAGGCTCGTTTTGGTGTTCTTCCACGCTATGCCAAGGATGAACTCATGATTAGATGGTTTGAGCTTCCCAACTGCTTTATATTCCATAACGCCAATGCTTGGGAAGAAGAGGATGAAGTCGTCCTCATCACTTGTCGCCTTGAGAATCCAGATCTTGACATGGTCGGCGGGGATGCGAAAGAAAAACTTGAGAACTTTAGCAACGAACTGTACGAAATGAGATTTAACATGAAAACGGGCTCAGCTTCTCAGAAAAAACTATCGCCATCTGCAGTTGATTTCCCCAGAATCAACGAGTGCTACACTGGAAAGAAACAGCGATATGTATATGGAACAATCCTGGACAGTATCGCCAAGGTTACAGGAATTATCAAGTTTGATCTGCATGCGGAAGCTGAGACAGGGAAAGAAATACTGGAAGTAGGAGGCAATATCAAAGGAATCTATGAGCTGGGTCAAGGCAGATACGGTTCAGAGGCTATATATGTCCCTCGTGAGGCAGGGGAAGAAGATGATGGTTACTTGATATTCTTTGTTCATGATGAAAACACAGGGAAATCATGTGTGAATGTGATTGACGCAAAAACAATGTCTGCTGAGCCAGTGGCAGTGGTGGAGCTGCCGCATAGGGTTCCATATGGCTTCCATGCCTTCTTTGTTACAGAGGAACAACTCCAGGAACAAACTCTTACATAA
Protein:  
MAENCIVSVNPKPSKGLSSKLLDLVERVVVKLMHDASLPLHYLSGNFAPVRDETPPVKDLPVVHGFLPECLNGEFVRVGPNPKFDPVAGYHWFDGDGMIHAVRIKDGKATYVSRYVKTSRLKQEEFFGAPKFMKIGDLKGLLGLLMVYLQQLRTKLKVLDVSYGHGTANTALVYHHGKLLALSEADKPYVVKVLEDGDLQTLGMMDYDKRLTHSFTAHPKVDPTTGEMFTFGYSQTPPYLTYRVISEDGFMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMVYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVGGDAKEKLENFSNELYEMRFNMKTGSASQKKLSPSAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKEILEVGGNIKGIYELGQGRYGSEAIYVPREAGEEDDGYLIFFVHDENTGKSCVNVIDAKTMSAEPVAVVELPHRVPYGFHAFFVTEEQLQEQTLT